Yu ChenPLANT REGENERATION

ABOUT

About me.

Yu Chen

Postdoctoral Fellow
VIB–UGent Center for Plant Systems Biology
Ghent, Belgium

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I study how plants regenerate and how cells acquire new identities.

Environmental signals. Cell fate. New beginnings.

EXPERIENCE

Research appointments

Postdoctoral Fellow

VIB–UGent Center for Plant Systems Biology

Postdoctoral Researcher

RIKEN Center for Sustainable Resource Science

Technical Staff

RIKEN Center for Sustainable Resource Science

EDUCATION

Academic background

Ph.D. in Biological Sciences

Department of Biological Sciences · The University of Tokyo

Supervisor: Prof. Keiko Sugimoto

Thesis

Determination of new meristem fate in plant regeneration

M.Sc. in Life Science

Graduate School of Life Science · Hokkaido University

Supervisor: Prof. Masaaki Watahiki

Thesis

Local and long-distance signaling in root-cutting response of Arabidopsis thaliana

B.Sc. in Life Science

School of Life Sciences · Chongqing University

BEYOND THE TIMELINE

Experience in practice.

Explore funding, methods, and contributions to the research community.

Funding & recognitionCompetitive support and selected distinctions.

JSPS Research Activity Start-up

Principal investigator · July 2024 – March 2026

Mechanisms for determining the fate of new meristems during plant regeneration.

Project 24K23218 · JPY 2,860,000

RIKEN Junior Research Associate

April 2021 – September 2023 · Environmental control of plant regeneration

Selected distinctions

  • RIKEN Research and Technology Incentive Award, 2026
  • Outstanding Poster Award, National Conference on Plant Stem Cell Biology, 2023
  • Invited speaker, International Symposium on Plant Stem Cells and Regeneration, 2024

Scholarships

Hokkaido International Exchange and Cooperation Center (2018–2019); Japan Student Services Organization (2017–2018); Chongqing University academic scholarships (2014–2016).

Methods & skillsFrom tissue culture to single-cell analysis.

Molecular & cellular

Molecular cloning · Genome engineering · Plant transformation · Tissue culture

Omics

Transcriptomics · Epigenomics · Single-cell omics

Imaging

Confocal microscopy · Live-cell imaging · Fiji image analysis

Computation

R · Python · Statistical analysis · LaTeX

Mentoring & teachingSupporting experimental and computational learning.

Research mentoring

Guided three doctoral students in bulk and single-cell RNA-seq analysis.

Undergraduate teaching

Teaching assistant for Basic Biology I and Natural Science Experiment (Biology), supporting laboratory classes in microscopy, DNA extraction, PCR, and other foundational methods.

Scientific service & collaborationBuilding connections across research communities.

Meeting organization

Main organizer, First ASPIRE Joint Lab Meeting in Japan (September 2024). Hosted CSRS seminars by Dr. Charles Melnyk (June 2024) and Dr. Facundo Romani (November 2024).

International collaborations

  • JST ASPIRE: induced plant reprogramming and a new bioeconomy platform, connecting teams in Japan, Belgium, the UK, and the US.
  • Single-cell regeneration: collaboration among RIKEN, Peking University, and the Chinese Academy of Sciences (2023–2025).
  • Plant resilience: Japanese research network on responses to fluctuating environments (2020–2025).
Selected presentationsInvited talks and international research exchange.

Plant Stem Cells and Regeneration

Invited oral presentation · International Symposium, November 2024

Mechanisms determining new meristem fate during plant regeneration.

Sainsbury Laboratory Symposium

Poster · September 2024

Light signals and meristem fate during de novo organogenesis.

Japanese Society of Plant Physiologists

Oral presentation · March 2024

HY5-dependent responses to light during new meristem formation.

International Conference on Arabidopsis Research

Poster · 2026

Signal transduction underlying wound-induced plant regeneration.